Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacid dehydrogenase | APR48_42990 | Not Available | Positive | 9292277 - 9293191 | 31945.6 |
| abc transporter permease | APR48_42995 | Not Available | Positive | 9293300 - 9294505 | 43294.5 |
| hypothetical protein | APR48_43005 | Not Available | Positive | 9295049 - 9296497 | 51105.8 |
| short-chain dehydrogenase | APR48_43010 | Not Available | Positive | 9296558 - 9297322 | 26832.1 |
| hypothetical protein | APR48_43015 | Not Available | Positive | 9297334 - 9297591 | 9625.51 |
| hypothetical protein | APR48_43020 | Not Available | Positive | 9297765 - 9298163 | 13781.4 |
| laci family transcriptional regulator | APR48_43025 | Not Available | Negative | 9298179 - 9299162 | 34550.0 |
| glyoxalase | APR48_43030 | Not Available | Positive | 9299454 - 9299831 | 13709.2 |
| alpha/beta hydrolase | APR48_43040 | Not Available | Positive | 9300054 - 9300965 | 32673.4 |
| oxidoreductase | APR48_43045 | Not Available | Positive | 9301000 - 9301791 | 27982.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
