Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylhydroperoxidase | APR48_42930 | Not Available | Negative | 9277865 - 9278326 | 17417.9 |
| rna polymerase subunit sigma-24 | APR48_42935 | Not Available | Negative | 9278417 - 9279310 | 33481.9 |
| ferritin | APR48_42940 | Not Available | Negative | 9279401 - 9280258 | 33565.0 |
| glutathione peroxidase | APR48_42945 | Not Available | Positive | 9280387 - 9281016 | 22252.7 |
| nadh-ubiquinone oxidoreductase subunit 6 | APR48_42950 | Not Available | Positive | 9281343 - 9282659 | 47585.8 |
| hypothetical protein | APR48_42955 | Not Available | Positive | 9282656 - 9283309 | 24316.9 |
| cellulose synthase | APR48_42965 | Not Available | Positive | 9284358 - 9286520 | 80606.3 |
| cellulose synthase | APR48_42970 | Not Available | Positive | 9286517 - 9288916 | 85380.8 |
| lysr family transcriptional regulator | APR48_42980 | Not Available | Negative | 9289727 - 9290680 | 34036.5 |
| aldehyde dehydrogenase | APR48_42985 | Not Available | Positive | 9290821 - 9292251 | 50703.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
