Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_42820 | Not Available | Positive | 9252831 - 9253469 | 23400.3 |
| mfs transporter | APR48_42825 | Not Available | Positive | 9253511 - 9254830 | 46054.6 |
| hypothetical protein | APR48_42830 | Not Available | Negative | 9254834 - 9257029 | 74590.2 |
| hypothetical protein | APR48_42835 | Not Available | Negative | 9257126 - 9257905 | 28775.4 |
| glutamate racemase | APR48_42840 | Not Available | Negative | 9257922 - 9258785 | 30267.3 |
| fad-dependent oxidoreductase | APR48_42845 | Not Available | Positive | 9258954 - 9260225 | 46788.5 |
| permease | APR48_42850 | Not Available | Negative | 9260237 - 9261010 | 26882.1 |
| lysr family transcriptional regulator | APR48_42855 | Not Available | Negative | 9261079 - 9261978 | 31846.8 |
| lysr family transcriptional regulator | APR48_42860 | Not Available | Negative | 9262006 - 9262986 | 35787.5 |
| mfs transporter | APR48_42865 | Not Available | Positive | 9263109 - 9264338 | 41407.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
