Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | APR48_42775 | Not Available | Positive | 9245994 - 9246509 | 19043.7 |
| hypothetical protein | APR48_42780 | Not Available | Positive | 9246549 - 9246827 | 10214.0 |
| aldehyde-activating protein | APR48_42785 | Not Available | Positive | 9246974 - 9247375 | 14642.4 |
| lysine transporter lyse | APR48_42790 | Not Available | Positive | 9247423 - 9248049 | 22063.5 |
| hypothetical protein | APR48_42795 | Not Available | Negative | 9248054 - 9248275 | 7980.27 |
| penicillin-binding protein 1c | APR48_42800 | Not Available | Positive | 9248614 - 9250911 | 82369.9 |
| hypothetical protein | APR48_42805 | Not Available | Positive | 9250908 - 9252404 | 52756.6 |
| Trna-gly | Not Available | Not Available | Positive | 9252404 - 9252483 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 9252547 - 9252620 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 9252718 - 9252809 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
