Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter permease | APR48_42725 | Not Available | Positive | 9230277 - 9231116 | 30233.4 |
| peptide abc transporter atp-binding protein | APR48_42730 | Not Available | Positive | 9231116 - 9232153 | 37165.6 |
| hypothetical protein | APR48_42735 | Not Available | Positive | 9232323 - 9233354 | 37550.2 |
| Trna-met | Not Available | Not Available | Positive | 9233390 - 9233466 | Not Available |
| hypothetical protein | APR48_42745 | Not Available | Positive | 9236166 - 9237302 | 42407.7 |
| hypothetical protein | APR48_42750 | Not Available | Positive | 9237419 - 9238498 | 40228.6 |
| hypothetical protein | APR48_42755 | Not Available | Positive | 9239446 - 9239694 | 8670.59 |
| transposase | APR48_42760 | Not Available | Negative | 9241624 - 9243162 | 58498.0 |
| hypothetical protein | APR48_42765 | Not Available | Positive | 9244898 - 9245134 | 8700.67 |
| hypothetical protein | APR48_42770 | Not Available | Positive | 9245157 - 9245474 | 11923.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
