Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein | APR48_42675 | Not Available | Positive | 9217409 - 9218491 | 39160.7 |
| potassium transporter | APR48_42680 | Not Available | Positive | 9218742 - 9220727 | 71482.0 |
| modulator protein | APR48_42685 | Not Available | Positive | 9221007 - 9222881 | 68346.3 |
| hypothetical protein | APR48_42690 | Not Available | Negative | 9222897 - 9224345 | 52153.8 |
| peptide abc transporter substrate-binding protein | APR48_42695 | Not Available | Negative | 9224380 - 9225372 | 36266.8 |
| rna polymerase subunit sigma-24 | APR48_42700 | Not Available | Negative | 9225509 - 9226282 | 27954.5 |
| atp-dependent clp protease proteolytic subunit | APR48_42705 | Not Available | Positive | 9226366 - 9226980 | 22248.5 |
| hypothetical protein | APR48_42710 | Not Available | Negative | 9227006 - 9227395 | 14017.7 |
| peptide abc transporter | APR48_42715 | Not Available | Positive | 9227592 - 9229163 | 57131.8 |
| peptide abc transporter | APR48_42720 | Not Available | Positive | 9229332 - 9230273 | 33225.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
