Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine amidotransferase | APR48_42500 | Not Available | Negative | 9168320 - 9168898 | 21025.0 |
| succinate-semialdehyde dehydrogenase | APR48_42505 | Not Available | Negative | 9169026 - 9170492 | 51507.9 |
| peptidase m48 | APR48_42510 | Not Available | Negative | 9170620 - 9171801 | 42164.1 |
| hypothetical protein | APR48_42515 | Not Available | Positive | 9172065 - 9173042 | 34256.8 |
| hypothetical protein | APR48_42520 | Not Available | Negative | 9173125 - 9175157 | 70835.1 |
| type vi secretion protein | APR48_42530 | Not Available | Negative | 9175392 - 9178994 | 133006.0 |
| hypothetical protein | APR48_42535 | Not Available | Negative | 9178991 - 9180358 | 48766.4 |
| type vi secretion protein | APR48_42540 | Not Available | Negative | 9180383 - 9181714 | 49277.5 |
| pyruvate ferredoxin oxidoreductase | APR48_42550 | Not Available | Negative | 9182738 - 9186281 | 127883.0 |
| asnc family transcriptional regulator | APR48_42555 | Not Available | Positive | 9186373 - 9186891 | 19059.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
