Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_42435 | Not Available | Positive | 9152865 - 9153350 | 16631.1 |
| pilus assembly protein pilv | APR48_42440 | Not Available | Positive | 9153382 - 9153918 | 18583.7 |
| pilus assembly protein pilw | APR48_42445 | Not Available | Positive | 9153959 - 9154780 | 28902.3 |
| pilus assembly protein pilx | APR48_42450 | Not Available | Positive | 9154777 - 9155352 | 20711.0 |
| fimbrial assembly protein | APR48_42455 | Not Available | Positive | 9155371 - 9159846 | 159340.0 |
| hypothetical protein | APR48_42465 | Not Available | Positive | 9160974 - 9161258 | 9430.05 |
| hypothetical protein | APR48_42470 | Not Available | Negative | 9161339 - 9162001 | 24492.4 |
| carboxymethylenebutenolidase | APR48_42475 | Not Available | Positive | 9162096 - 9163310 | 44440.0 |
| lysr family transcriptional regulator | APR48_42480 | Not Available | Positive | 9163324 - 9164262 | 33530.8 |
| dihydroxy-acid dehydratase | APR48_42490 | Not Available | Negative | 9165661 - 9167448 | 63811.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
