Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase | APR48_42370 | Not Available | Negative | 9141229 - 9142635 | 50706.3 |
| translation initiation factor if-1 | APR48_42375 | Not Available | Negative | 9142773 - 9143051 | 10231.3 |
| abc transporter substrate-binding protein | APR48_42385 | Not Available | Negative | 9144358 - 9145326 | 33801.7 |
| lysr family transcriptional regulator | APR48_42390 | Not Available | Positive | 9145516 - 9146448 | 33649.9 |
| hypothetical protein | APR48_42395 | Not Available | Negative | 9146485 - 9146688 | 7445.66 |
| hypothetical protein | APR48_42400 | Not Available | Positive | 9146698 - 9147126 | 15354.2 |
| stress responsive protein | APR48_42405 | Not Available | Negative | 9147263 - 9147622 | 13155.6 |
| hypothetical protein | APR48_42410 | Not Available | Negative | 9147643 - 9147945 | 11121.3 |
| acyl-coa dehydrogenase | APR48_42415 | Not Available | Negative | 9148070 - 9149230 | 42615.2 |
| histidine kinase | APR48_42420 | Not Available | Negative | 9149309 - 9150115 | 27493.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
