Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR48_42265 | Not Available | Negative | 9120214 - 9121119 | 33155.5 |
| nad-dependent epimerase | APR48_42270 | Not Available | Positive | 9121206 - 9122225 | 35645.7 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR48_42275 | Not Available | Positive | 9122290 - 9123261 | 35201.5 |
| c4-dicarboxylate abc transporter | APR48_42280 | Not Available | Positive | 9123385 - 9123879 | 18510.3 |
| c4-dicarboxylate abc transporter permease | APR48_42285 | Not Available | Positive | 9123876 - 9125153 | 45123.3 |
| arac family transcriptional regulator | APR48_42290 | Not Available | Negative | 9125164 - 9125979 | 29322.8 |
| mfs transporter | APR48_42295 | Not Available | Positive | 9126120 - 9127313 | 40313.0 |
| dna-binding protein | APR48_42300 | Not Available | Positive | 9127585 - 9128544 | 33785.8 |
| glutamine cyclotransferase | APR48_42305 | Not Available | Positive | 9128593 - 9129255 | 23654.6 |
| thioredoxin | APR48_42310 | Not Available | Positive | 9129285 - 9130055 | 28979.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
