Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_42155 | Not Available | Negative | 9094642 - 9094878 | 8690.64 |
| translation initiation factor sui1 | APR48_42160 | Not Available | Negative | 9094878 - 9095264 | 13290.1 |
| rna helicase | APR48_42165 | Not Available | Positive | 9095397 - 9096662 | 45464.7 |
| hypothetical protein | APR48_42170 | Not Available | Negative | 9096656 - 9097837 | 42916.7 |
| hypothetical protein | APR48_42175 | Not Available | Negative | 9097860 - 9099341 | 53552.6 |
| peptidase m20 | APR48_42180 | Not Available | Negative | 9099481 - 9100908 | 50535.9 |
| carboxylesterase | APR48_42185 | Not Available | Negative | 9100920 - 9102493 | 54449.3 |
| l-aspartate oxidase | APR48_42190 | Not Available | Negative | 9102494 - 9103821 | 46738.6 |
| segregation and condensation protein a | APR48_42195 | Not Available | Negative | 9103947 - 9104789 | 32124.3 |
| acetyl-coa carboxyl transferase | APR48_42200 | Not Available | Negative | 9104865 - 9105071 | 8068.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
