Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | APR48_42105 | Not Available | Positive | 9085493 - 9087093 | 58590.8 |
| copg family transcriptional regulator | APR48_42110 | Not Available | Positive | 9087090 - 9087599 | 19015.7 |
| conjugal transfer protein trbb | APR48_42115 | Not Available | Positive | 9087596 - 9088642 | 37145.7 |
| conjugal transfer protein trbc | APR48_42120 | Not Available | Positive | 9088639 - 9088971 | 11429.2 |
| conjugal transfer protein trbd | APR48_42125 | Not Available | Positive | 9088968 - 9089249 | 9824.13 |
| conjugal transfer protein trbe | APR48_42130 | Not Available | Positive | 9089259 - 9091718 | 90455.2 |
| conjugal transfer protein trbj | APR48_42135 | Not Available | Positive | 9091715 - 9092473 | 27561.8 |
| hypothetical protein | APR48_42140 | Not Available | Positive | 9092481 - 9092747 | 9493.54 |
| conjugal transfer protein trbl | APR48_42145 | Not Available | Positive | 9092744 - 9094051 | 43427.0 |
| rna-binding protein | APR48_42150 | Not Available | Negative | 9094052 - 9094450 | 12806.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
