Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase snf2 | APR48_41945 | Not Available | Positive | 9048516 - 9048849 | 10704.2 |
| hypothetical protein | APR48_41950 | Not Available | Positive | 9049389 - 9049994 | 22432.1 |
| vanw family protein | APR48_41955 | Not Available | Positive | 9049967 - 9051823 | 67536.9 |
| hypothetical protein | APR48_41960 | Not Available | Positive | 9051820 - 9053493 | 60244.0 |
| alkane 1-monooxygenase | APR48_41965 | Not Available | Positive | 9053538 - 9054530 | 35664.5 |
| pp_08298 | APR48_41970 | Not Available | Positive | 9054595 - 9055707 | Not Available |
| nudix hydrolase | APR48_41975 | Not Available | Negative | 9055714 - 9056196 | 17734.0 |
| two-component system response regulator | APR48_41980 | Not Available | Negative | 9056288 - 9057013 | 27403.2 |
| hypothetical protein | APR48_41995 | Not Available | Negative | 9058319 - 9060697 | 86514.7 |
| hypothetical protein | APR48_42000 | Not Available | Negative | 9060700 - 9061704 | 35413.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
