Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_41890 | Not Available | Negative | 9039126 - 9039419 | 9623.31 |
| catechol 2,3-dioxygenase | APR48_41895 | Not Available | Positive | 9039487 - 9040419 | 35023.7 |
| 2-hydroxymuconic semialdehyde dehydrogenase | APR48_41900 | Not Available | Positive | 9040430 - 9041884 | 51524.7 |
| 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase | APR48_41905 | Not Available | Positive | 9041895 - 9042719 | 29900.9 |
| 2-oxopent-4-enoate hydratase | APR48_41910 | Not Available | Positive | 9042749 - 9043531 | 27262.1 |
| acetaldehyde dehydrogenase (acetylating) | APR48_41915 | Not Available | Positive | 9043545 - 9044468 | 32168.1 |
| 4-hydroxy-2-oxovalerate aldolase | APR48_41920 | Not Available | Positive | 9044482 - 9045525 | 37101.1 |
| 4-oxalocrotonate decarboxylase | APR48_41925 | Not Available | Positive | 9045522 - 9046310 | 27695.5 |
| 4-oxalocrotonate tautomerase | APR48_41930 | Not Available | Positive | 9046330 - 9046521 | 7043.5 |
| 3-oxoadipate enol-lactonase | APR48_41940 | Not Available | Positive | 9047581 - 9048381 | 28702.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
