Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_41840 | Not Available | Positive | 9032904 - 9033254 | 12866.9 |
| anthranilate synthase | APR48_41845 | Not Available | Positive | 9033361 - 9033945 | 20876.0 |
| threonine aldolase | APR48_41850 | Not Available | Positive | 9033950 - 9035008 | 37239.6 |
| lysine transporter lyse | APR48_41855 | Not Available | Positive | 9035036 - 9035695 | 22964.7 |
| anthranilate phosphoribosyltransferase | APR48_41860 | Not Available | Positive | 9035717 - 9036739 | 35901.6 |
| indole-3-glycerol-phosphate synthase | APR48_41865 | Not Available | Positive | 9036772 - 9037572 | 28556.5 |
| uracil-dna glycosylase | APR48_41870 | Not Available | Positive | 9037569 - 9038276 | 25328.4 |
| Trna-tyr | Not Available | Not Available | Positive | 9038387 - 9038472 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 9038538 - 9038611 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 9038643 - 9038717 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
