Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citryl-coa lyase | APR48_41775 | Not Available | Negative | 9018281 - 9019144 | 29522.7 |
| short-chain dehydrogenase | APR48_41785 | Not Available | Positive | 9019905 - 9020666 | 26531.8 |
| gcn5 family acetyltransferase | APR48_41790 | Not Available | Negative | 9020716 - 9021171 | 16767.1 |
| hypothetical protein | APR48_41795 | Not Available | Positive | 9021345 - 9021605 | 9326.73 |
| nucleotide pyrophosphohydrolase | APR48_41800 | Not Available | Positive | 9022647 - 9023489 | 31545.6 |
| lysr family transcriptional regulator | APR48_41805 | Not Available | Negative | 9025398 - 9026300 | 33155.4 |
| nad(p)h dehydrogenase | APR48_41810 | Not Available | Positive | 9026402 - 9027208 | 29674.2 |
| phosphoglycolate phosphatase | APR48_41825 | Not Available | Positive | 9029592 - 9030320 | 25960.0 |
| hypothetical protein | APR48_41830 | Not Available | Negative | 9030336 - 9030935 | 21225.2 |
| anthranilate synthase | APR48_41835 | Not Available | Positive | 9031306 - 9032808 | 54817.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
