Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_41720 | Not Available | Positive | 9004044 - 9005609 | 54850.7 |
| hypothetical protein | APR48_41725 | Not Available | Negative | 9005552 - 9006283 | 26619.1 |
| glycine dehydrogenase | APR48_41730 | Not Available | Negative | 9006289 - 9009191 | 103733.0 |
| tonb-dependent receptor | APR48_41740 | Not Available | Negative | 9010210 - 9012405 | 79526.0 |
| hypothetical protein | APR48_41745 | Not Available | Negative | 9012880 - 9013176 | 10584.4 |
| hypothetical protein | APR48_41750 | Not Available | Positive | 9013422 - 9013826 | 14760.6 |
| sodium:proton antiporter | APR48_41755 | Not Available | Negative | 9013836 - 9015578 | 61050.8 |
| 3-ketoacyl-acp reductase | APR48_41760 | Not Available | Negative | 9015716 - 9016453 | 25953.1 |
| damage-inducible protein | APR48_41765 | Not Available | Positive | 9016659 - 9017192 | 18059.5 |
| hypothetical protein | APR48_41770 | Not Available | Negative | 9017205 - 9018221 | 35878.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
