Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| entry exclusion lipoprotein trbk | APR48_41670 | Not Available | Positive | 8992222 - 8992491 | 10068.2 |
| conjugal transfer protein trag | APR48_41675 | Not Available | Positive | 8992736 - 8994757 | 73388.6 |
| copg family transcriptional regulator | APR48_41680 | Not Available | Positive | 8994754 - 8995254 | 18729.0 |
| conjugal transfer protein trbb | APR48_41685 | Not Available | Positive | 8995251 - 8996294 | 36807.6 |
| conjugal transfer protein trbc | APR48_41690 | Not Available | Positive | 8996291 - 8996695 | 14059.4 |
| conjugal transfer protein trbd | APR48_41695 | Not Available | Positive | 8996692 - 8996976 | 9814.11 |
| conjugal transfer protein trbe | APR48_41700 | Not Available | Positive | 8996987 - 8999059 | 76069.7 |
| fad-dependent oxidoreductase | APR48_41705 | Not Available | Negative | 8999072 - 9000751 | 61711.1 |
| glycerol kinase | APR48_41710 | Not Available | Negative | 9000748 - 9002304 | 54811.4 |
| mfs transporter | APR48_41715 | Not Available | Negative | 9002304 - 9003773 | 52841.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
