Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_41565 | Not Available | Positive | 8969034 - 8969714 | 25115.5 |
| cytochrome c oxidase subunit i | APR48_41570 | Not Available | Positive | 8969753 - 8970991 | 44080.2 |
| protoheme ix farnesyltransferase | APR48_41575 | Not Available | Positive | 8970988 - 8971893 | 33080.3 |
| photosynthetic protein synthase i | APR48_41580 | Not Available | Positive | 8971898 - 8972515 | 22002.4 |
| dna alkylation repair protein | APR48_41585 | Not Available | Positive | 8972520 - 8973383 | 31508.8 |
| rna polymerase factor sigma-32 | APR48_41590 | Not Available | Negative | 8973444 - 8974385 | 34472.2 |
| hypothetical protein | APR48_41595 | Not Available | Negative | 8974557 - 8975027 | 17465.9 |
| luxr family transcriptional regulator | APR48_41600 | Not Available | Positive | 8975204 - 8975929 | 25345.5 |
| histidine kinase | APR48_41605 | Not Available | Positive | 8975940 - 8977730 | 65085.1 |
| hypothetical protein | APR48_41610 | Not Available | Negative | 8977743 - 8978662 | 32588.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
