Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | APR48_41515 | Not Available | Positive | 8961551 - 8961877 | 11750.0 |
| hypothetical protein | APR48_41520 | Not Available | Positive | 8961915 - 8962526 | 21975.8 |
| anti-sigm factor, chrr | APR48_41525 | Not Available | Positive | 8962645 - 8963049 | 15125.0 |
| hypothetical protein | APR48_41530 | Not Available | Positive | 8963222 - 8963800 | 20943.1 |
| abc transporter substrate-binding protein | APR48_41535 | Not Available | Negative | 8963805 - 8964971 | 40352.7 |
| hypothetical protein | APR48_41540 | Not Available | Positive | 8965055 - 8965528 | 16471.8 |
| trna (guanine-n7)-methyltransferase | APR48_41545 | Not Available | Negative | 8965545 - 8966288 | 27590.0 |
| glutamyl-q trna(asp) ligase | APR48_41550 | Not Available | Negative | 8966285 - 8967199 | 32993.1 |
| amine oxidase | APR48_41555 | Not Available | Negative | 8967240 - 8968296 | 37858.9 |
| transmembrane cytochrome oxidase | APR48_41560 | Not Available | Positive | 8968301 - 8969047 | 27327.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
