Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| teicoplanin resistance protein vanz | APR48_41465 | Not Available | Positive | 8950584 - 8951702 | 40278.6 |
| 2fe-2s ferredoxin | APR48_41470 | Not Available | Positive | 8951746 - 8952102 | 12923.3 |
| alpha/beta hydrolase | APR48_41475 | Not Available | Positive | 8952191 - 8952829 | 22244.7 |
| cytochrome c | APR48_41480 | Not Available | Positive | 8952875 - 8954044 | 42083.3 |
| 30s ribosomal protein s12 | APR48_41485 | Not Available | Positive | 8954265 - 8954642 | 13976.1 |
| 30s ribosomal protein s7 | APR48_41490 | Not Available | Positive | 8954798 - 8955271 | 18023.2 |
| elongation factor g | APR48_41495 | Not Available | Positive | 8955367 - 8957466 | 77248.8 |
| lysr family transcriptional regulator | APR48_41500 | Not Available | Positive | 8957860 - 8958502 | 23759.5 |
| voltage-gated chloride channel protein | APR48_41505 | Not Available | Negative | 8958515 - 8959771 | 44510.2 |
| mfs transporter | APR48_41510 | Not Available | Positive | 8960212 - 8961540 | 47579.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
