Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_41415 | Not Available | Positive | 8941288 - 8941716 | 16047.0 |
| isocitrate dehydrogenase | APR48_41420 | Not Available | Positive | 8941829 - 8942860 | 36477.4 |
| hypothetical protein | APR48_41425 | Not Available | Positive | 8942886 - 8943614 | 26664.2 |
| hypothetical protein | APR48_41430 | Not Available | Positive | 8943646 - 8944326 | 24088.9 |
| patatin | APR48_41435 | Not Available | Negative | 8944338 - 8945555 | 43112.0 |
| atp-binding protein | APR48_41440 | Not Available | Positive | 8945632 - 8946723 | 38099.3 |
| hypothetical protein | APR48_41445 | Not Available | Positive | 8947107 - 8947475 | 12466.6 |
| magnesium transporter cora | APR48_41450 | Not Available | Negative | 8947576 - 8948730 | 42984.9 |
| delta-aminolevulinic acid dehydratase | APR48_41455 | Not Available | Negative | 8948790 - 8949806 | 36528.9 |
| hypothetical protein | APR48_41460 | Not Available | Positive | 8950150 - 8950578 | 16285.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
