Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_41350 | Not Available | Negative | 8928852 - 8929163 | 11419.5 |
| hypothetical protein | APR48_41355 | Not Available | Negative | 8929160 - 8929684 | 19489.6 |
| hypothetical protein | APR48_41360 | Not Available | Positive | 8929938 - 8930171 | 9350.15 |
| hypothetical protein | APR48_41365 | Not Available | Negative | 8930199 - 8930912 | 26743.2 |
| hypothetical protein | APR48_41370 | Not Available | Negative | 8931056 - 8932051 | 36680.8 |
| hypothetical protein | APR48_41385 | Not Available | Negative | 8932989 - 8934896 | 72722.8 |
| amidase | APR48_41395 | Not Available | Negative | 8936527 - 8937960 | 49332.0 |
| hypothetical protein | APR48_41400 | Not Available | Positive | 8938100 - 8938852 | 26403.3 |
| hypothetical protein | APR48_41405 | Not Available | Negative | 8938876 - 8939094 | 6756.17 |
| methionine--trna ligase | APR48_41410 | Not Available | Negative | 8939124 - 8941220 | 76691.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
