Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | APR48_41210 | Not Available | Positive | 8898089 - 8898775 | 24051.8 |
| mfs transporter | APR48_41215 | Not Available | Negative | 8898785 - 8900290 | 51213.1 |
| hypothetical protein | APR48_41220 | Not Available | Negative | 8900294 - 8900824 | 19050.9 |
| hypothetical protein | APR48_41230 | Not Available | Positive | 8901201 - 8903269 | 73962.6 |
| hypothetical protein | APR48_41235 | Not Available | Positive | 8903313 - 8903753 | 15319.3 |
| thiolase | APR48_41240 | Not Available | Positive | 8903750 - 8904910 | 39566.7 |
| hypothetical protein | APR48_41245 | Not Available | Positive | 8904907 - 8905794 | 31887.7 |
| acetoacetyl-coa synthetase | APR48_41250 | Not Available | Positive | 8905797 - 8907818 | 75748.8 |
| methylcrotonoyl-coa carboxylase | APR48_41255 | Not Available | Negative | 8907868 - 8909367 | 52391.8 |
| methylcrotonoyl-coa carboxylase | APR48_41260 | Not Available | Negative | 8909399 - 8910898 | 53317.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
