Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_41160 | Not Available | Positive | 8888594 - 8889229 | 21710.9 |
| hypothetical protein | APR48_41165 | Not Available | Negative | 8889253 - 8890211 | 32857.2 |
| aldolase | APR48_41170 | Not Available | Negative | 8890258 - 8891046 | 29046.9 |
| tricarballylate utilization protein b | APR48_41175 | Not Available | Negative | 8891081 - 8892259 | 42622.5 |
| tricarballylate dehydrogenase | APR48_41180 | Not Available | Negative | 8892294 - 8893721 | 51474.4 |
| lysr family transcriptional regulator | APR48_41185 | Not Available | Negative | 8893799 - 8894725 | 33337.6 |
| bile acid:sodium symporter | APR48_41190 | Not Available | Negative | 8894733 - 8895611 | 30989.1 |
| aldolase | APR48_41195 | Not Available | Negative | 8895711 - 8896478 | 28102.6 |
| phosphohydrolase | APR48_41200 | Not Available | Negative | 8896505 - 8897095 | 22496.6 |
| crp/fnr family transcriptional regulator | APR48_41205 | Not Available | Positive | 8897270 - 8897989 | 25817.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
