Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | APR48_41110 | Not Available | Positive | 8878139 - 8878762 | 22623.2 |
| hypothetical protein | APR48_41115 | Not Available | Positive | 8878875 - 8879105 | 8314.86 |
| hypothetical protein | APR48_41120 | Not Available | Negative | 8879113 - 8880411 | 47350.6 |
| glucose 1-dehydrogenase | APR48_41125 | Not Available | Positive | 8880772 - 8881503 | 25086.7 |
| monooxygenase | APR48_41130 | Not Available | Positive | 8881556 - 8882851 | 47842.5 |
| mfs transporter | APR48_41135 | Not Available | Positive | 8882923 - 8884140 | 41812.2 |
| multidrug mfs transporter | APR48_41140 | Not Available | Positive | 8884140 - 8885579 | 49206.4 |
| paraquat-inducible protein a | APR48_41145 | Not Available | Positive | 8885600 - 8886238 | 22812.6 |
| paraquat-inducible protein a | APR48_41150 | Not Available | Positive | 8886235 - 8886948 | 25886.8 |
| mammalian cell entry protein | APR48_41155 | Not Available | Positive | 8886945 - 8888597 | 60771.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
