Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | APR48_41060 | Not Available | Negative | 8867734 - 8868759 | 37018.6 |
| competence protein coml | APR48_41065 | Not Available | Positive | 8868774 - 8869577 | 30085.5 |
| helicase | APR48_41070 | Not Available | Negative | 8869658 - 8871805 | 77816.0 |
| hypothetical protein | APR48_41075 | Not Available | Negative | 8871817 - 8872020 | 7724.35 |
| serine/threonine protein phosphatase | APR48_41080 | Not Available | Positive | 8872135 - 8872902 | 27905.4 |
| hypothetical protein | APR48_41085 | Not Available | Negative | 8872934 - 8873599 | 25100.2 |
| atpase | APR48_41090 | Not Available | Negative | 8873596 - 8874693 | 42165.0 |
| dihydrolipoamide dehydrogenase | APR48_41095 | Not Available | Negative | 8874767 - 8876197 | 50157.1 |
| dihydrolipoamide succinyltransferase | APR48_41100 | Not Available | Negative | 8876212 - 8877139 | 32781.7 |
| mfs transporter | APR48_41105 | Not Available | Positive | 8877140 - 8878142 | 34906.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
