Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_03280 | Not Available | Negative | 704795 - 705247 | 16172.6 |
| hypothetical protein | APR48_03285 | Not Available | Negative | 705264 - 705980 | 25578.6 |
| lysr family transcriptional regulator | APR48_03290 | Not Available | Negative | 705977 - 706972 | 37139.6 |
| abc transporter atp-binding protein | APR48_03295 | Not Available | Negative | 707049 - 708089 | 37443.9 |
| damage-inducible protein dinb | APR48_03300 | Not Available | Positive | 708318 - 708827 | 18515.7 |
| hypothetical protein | APR48_03305 | Not Available | Positive | 709003 - 710043 | 37140.5 |
| spermidine/putrescine abc transporter atp-binding protein | APR48_03310 | Not Available | Positive | 710054 - 711145 | 38589.5 |
| abc transporter permease | APR48_03315 | Not Available | Positive | 711154 - 712008 | 30142.9 |
| abc transporter permease | APR48_03320 | Not Available | Positive | 712005 - 712799 | 28265.6 |
| chitin deacetylase | APR48_03325 | Not Available | Positive | 712814 - 713728 | 34417.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
