Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_14135 | Not Available | Positive | 2999600 - 2999941 | 12082.6 |
| hypothetical protein | APR48_14140 | Not Available | Positive | 3000035 - 3000316 | 10800.0 |
| Endolysin gp23 | APR48_14145 | Not Available | Positive | 3000716 - 3001180 | 17127.7 |
| hypothetical protein | APR48_14150 | Not Available | Negative | 3001220 - 3001696 | 17196.5 |
| Hypothetical protein | APR48_14155 | Not Available | Positive | 3001786 - 3002292 | 18528.2 |
| hypothetical protein | APR48_14160 | Not Available | Positive | 3002289 - 3002885 | 20921.3 |
| Gp54 | APR48_14165 | Not Available | Positive | 3002882 - 3003232 | 12775.4 |
| Hypothetical protein | APR48_14170 | Not Available | Positive | 3003229 - 3003552 | 12450.1 |
| Gp27 | APR48_14175 | Not Available | Positive | 3003556 - 3004095 | 19496.3 |
| Portal protein | APR48_14180 | Not Available | Positive | 3004122 - 3005579 | 55300.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
