Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-binding oxidoreductase | APR48_41010 | Not Available | Negative | 8851409 - 8852197 | 26524.5 |
| glutamate-ammonia-ligase adenylyltransferase | APR48_41015 | Not Available | Negative | 8852333 - 8855149 | 104714.0 |
| hypothetical protein | APR48_41020 | Not Available | Positive | 8855175 - 8859524 | 153690.0 |
| acyltransferase | APR48_41025 | Not Available | Positive | 8859521 - 8860336 | 29719.4 |
| histidine kinase | APR48_41030 | Not Available | Positive | 8860414 - 8862450 | 74630.3 |
| two-component system response regulator | APR48_41035 | Not Available | Positive | 8862495 - 8863121 | 23162.2 |
| flagellar motor protein motb | APR48_41040 | Not Available | Negative | 8863183 - 8863755 | 19599.0 |
| hypothetical protein | APR48_41045 | Not Available | Negative | 8863865 - 8864527 | 22369.4 |
| pseudouridine synthase | APR48_41050 | Not Available | Negative | 8864948 - 8866707 | 63561.9 |
| segregation and condensation protein b | APR48_41055 | Not Available | Negative | 8866704 - 8867597 | 32256.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
