Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | APR48_40895 | Not Available | Negative | 8828288 - 8830585 | 82888.1 |
| hypothetical protein | APR48_40900 | Not Available | Negative | 8830703 - 8831074 | 12799.0 |
| polysaccharide biosynthesis protein gumn | APR48_40905 | Not Available | Negative | 8831086 - 8832282 | 41464.8 |
| dioxygenase | APR48_40910 | Not Available | Positive | 8832484 - 8832897 | 15397.3 |
| abc transporter substrate-binding protein | APR48_40920 | Not Available | Negative | 8834119 - 8835093 | 34390.7 |
| hypothetical protein | APR48_40925 | Not Available | Negative | 8835113 - 8835334 | 7740.22 |
| fad-dependent oxidoreductase | APR48_40930 | Not Available | Negative | 8835331 - 8837121 | 63682.0 |
| luxr family transcriptional regulator | APR48_40935 | Not Available | Positive | 8837210 - 8837995 | 28250.1 |
| fumarylacetoacetate hydrolase | APR48_40940 | Not Available | Negative | 8838006 - 8839103 | 39296.6 |
| hypothetical protein | APR48_40950 | Not Available | Negative | 8839432 - 8839655 | 7885.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
