Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_40730 | Not Available | Positive | 8781050 - 8781730 | 25137.1 |
| hypothetical protein | APR48_40735 | Not Available | Positive | 8783148 - 8786585 | 122801.0 |
| hypothetical protein | APR48_40740 | Not Available | Negative | 8786753 - 8787604 | 31692.9 |
| metallophosphoesterase | APR48_40745 | Not Available | Positive | 8787738 - 8788514 | 27660.1 |
| gntr family transcriptional regulator | APR48_40750 | Not Available | Negative | 8788533 - 8789264 | 26809.3 |
| 3-carboxy-cis,cis-muconate cycloisomerase | APR48_40755 | Not Available | Positive | 8789358 - 8790734 | 49581.2 |
| sodium:dicarboxylate symporter | APR48_40760 | Not Available | Positive | 8790759 - 8792114 | 47453.1 |
| fumarate hydratase | APR48_40765 | Not Available | Positive | 8792119 - 8793543 | 50274.5 |
| glutathione s-transferase | APR48_40770 | Not Available | Negative | 8793509 - 8794213 | 26200.7 |
| hypothetical protein | APR48_40775 | Not Available | Positive | 8794428 - 8795156 | 25528.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
