Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | APR48_40670 | Not Available | Negative | 8760642 - 8761385 | 27084.2 |
| histidine kinase | APR48_40675 | Not Available | Negative | 8761428 - 8763323 | 70089.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | APR48_40680 | Not Available | Negative | 8763548 - 8765326 | 61906.4 |
| pyruvate dehydrogenase | APR48_40685 | Not Available | Positive | 8765655 - 8768324 | 97624.0 |
| hypothetical protein | APR48_40690 | Not Available | Positive | 8768387 - 8768944 | 21108.2 |
| rna 2'-phosphotransferase | APR48_40695 | Not Available | Negative | 8768946 - 8769497 | 19521.2 |
| hypothetical protein | APR48_40700 | Not Available | Negative | 8769494 - 8770387 | 32246.2 |
| hypothetical protein | APR48_40705 | Not Available | Positive | 8770483 - 8770983 | 18326.1 |
| glutathione s-transferase | APR48_40710 | Not Available | Negative | 8770985 - 8771713 | 26990.9 |
| permease | APR48_40715 | Not Available | Negative | 8771808 - 8772731 | 32008.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
