Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter substrate-binding protein | APR48_40620 | Not Available | Negative | 8752172 - 8753686 | 54740.2 |
| peptidase s58 | APR48_40625 | Not Available | Negative | 8753705 - 8754739 | 34373.3 |
| amino acid dehydrogenase | APR48_40630 | Not Available | Positive | 8754787 - 8756088 | 45438.5 |
| hypothetical protein | APR48_40635 | Not Available | Negative | 8756101 - 8756397 | 11447.7 |
| rnd transporter | APR48_40640 | Not Available | Negative | 8756683 - 8756973 | 10311.8 |
| metal-binding protein | APR48_40645 | Not Available | Negative | 8757009 - 8757458 | 16134.5 |
| plastocyanin | APR48_40650 | Not Available | Negative | 8757477 - 8757989 | 18406.4 |
| copper oxidase | APR48_40655 | Not Available | Negative | 8758020 - 8759405 | 50641.8 |
| hypothetical protein | APR48_40660 | Not Available | Positive | 8759564 - 8760055 | 18389.6 |
| abc transporter permease | APR48_40665 | Not Available | Negative | 8760056 - 8760649 | 21130.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
