Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| impact family protein | APR48_40570 | Not Available | Negative | 8741795 - 8742382 | 20274.6 |
| methionine biosynthesis protein metw | APR48_40575 | Not Available | Negative | 8742399 - 8742986 | 21878.3 |
| homoserine o-acetyltransferase | APR48_40580 | Not Available | Negative | 8742983 - 8744143 | 42412.0 |
| hypothetical protein | APR48_40585 | Not Available | Negative | 8744300 - 8744863 | 20292.4 |
| rna-binding protein | APR48_40590 | Not Available | Positive | 8745328 - 8745688 | 11674.6 |
| rna helicase | APR48_40595 | Not Available | Negative | 8745689 - 8747410 | 60862.5 |
| abc transporter atp-binding protein | APR48_40600 | Not Available | Positive | 8747754 - 8749415 | 61370.1 |
| 4-carboxymuconolactone decarboxylase | APR48_40605 | Not Available | Negative | 8749431 - 8749892 | 16268.6 |
| merr family transcriptional regulator | APR48_40610 | Not Available | Negative | 8749801 - 8750307 | 18686.3 |
| aminobenzoate synthetase | APR48_40615 | Not Available | Negative | 8750368 - 8752122 | 63231.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
