Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_40510 | Not Available | Positive | 8730307 - 8730684 | 12635.0 |
| glutathione peroxidase | APR48_40515 | Not Available | Negative | 8730688 - 8731179 | 17589.0 |
| hypothetical protein | APR48_40530 | Not Available | Positive | 8732122 - 8732580 | 14811.9 |
| mfs transporter | APR48_40535 | Not Available | Positive | 8732710 - 8733879 | 40870.9 |
| hypothetical protein | APR48_40540 | Not Available | Positive | 8733899 - 8736835 | 107067.0 |
| alpha/beta hydrolase | APR48_40545 | Not Available | Negative | 8736846 - 8737709 | 30649.7 |
| peptidase m20 | APR48_40550 | Not Available | Negative | 8737706 - 8739217 | 54196.6 |
| hypothetical protein | APR48_40555 | Not Available | Positive | 8739313 - 8740215 | 33233.6 |
| cell shape determination protein ccma | APR48_40560 | Not Available | Negative | 8740216 - 8740755 | 18356.8 |
| ion transporter | APR48_40565 | Not Available | Positive | 8740897 - 8741850 | 34638.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
