Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonopyruvate decarboxylase | APR48_03230 | Not Available | Negative | 693555 - 694073 | 18789.6 |
| carnitine dehydratase | APR48_03235 | Not Available | Negative | 694119 - 695597 | 53318.6 |
| abc transporter substrate-binding protein | APR48_03240 | Not Available | Negative | 695715 - 696635 | 32750.1 |
| aminotransferase | APR48_03245 | Not Available | Negative | 696632 - 697942 | 46990.7 |
| aldolase | APR48_03250 | Not Available | Positive | 698195 - 699037 | 29747.9 |
| lysr family transcriptional regulator | APR48_03255 | Not Available | Negative | 699087 - 700013 | 33731.4 |
| 2-methylcitrate dehydratase | APR48_03260 | Not Available | Negative | 700060 - 701436 | 48120.1 |
| coa-transferase | APR48_03265 | Not Available | Negative | 701450 - 702646 | 43175.5 |
| acyl-coa dehydrogenase | APR48_03270 | Not Available | Negative | 702652 - 703815 | 43259.6 |
| acyl-coa dehydrogenase | APR48_03275 | Not Available | Negative | 703838 - 704692 | 31417.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
