Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_40460 | Not Available | Positive | 8720212 - 8721021 | 28822.6 |
| transcriptional regulator | APR48_40465 | Not Available | Positive | 8721086 - 8721424 | 12274.0 |
| ammonia channel protein | APR48_40470 | Not Available | Positive | 8721454 - 8722875 | 47676.5 |
| gluconolactonase | APR48_40475 | Not Available | Positive | 8723139 - 8724068 | 33525.6 |
| lysr family transcriptional regulator | APR48_40480 | Not Available | Positive | 8724086 - 8724979 | 32355.7 |
| glycolate oxidase subunit glcd | APR48_40485 | Not Available | Positive | 8725119 - 8726621 | 53234.1 |
| glycolate oxidase | APR48_40490 | Not Available | Positive | 8726630 - 8727748 | 39326.9 |
| hypothetical protein | APR48_40495 | Not Available | Positive | 8727757 - 8728569 | 28801.9 |
| glycolate oxidase iron-sulfur subunit | APR48_40500 | Not Available | Positive | 8728613 - 8729848 | 44352.8 |
| hypothetical protein | APR48_40505 | Not Available | Negative | 8729853 - 8730080 | 8038.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
