Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | APR48_40405 | Not Available | Positive | 8708021 - 8709382 | 49155.8 |
| pyruvate carboxylase | APR48_40410 | Not Available | Positive | 8709393 - 8710856 | 53644.1 |
| hypothetical protein | APR48_40415 | Not Available | Positive | 8710853 - 8711644 | 28624.3 |
| 3-keto-5-aminohexanoate cleavage protein | APR48_40420 | Not Available | Positive | 8711641 - 8712582 | 34309.3 |
| hypothetical protein | APR48_40425 | Not Available | Negative | 8712624 - 8713502 | 32437.2 |
| abc transporter permease | APR48_40430 | Not Available | Positive | 8713796 - 8715067 | 45831.9 |
| hypothetical protein | APR48_40435 | Not Available | Positive | 8715440 - 8716354 | 33350.2 |
| hypothetical protein | APR48_40445 | Not Available | Positive | 8717154 - 8717777 | 21300.2 |
| isochorismatase | APR48_40450 | Not Available | Negative | 8717794 - 8718336 | 19415.2 |
| atp-dependent protease | APR48_40455 | Not Available | Negative | 8718390 - 8719928 | 54112.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
