Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | APR48_40250 | Not Available | Negative | 8677558 - 8678526 | 34939.0 |
| peptidylprolyl isomerase | APR48_40255 | Not Available | Negative | 8678558 - 8679010 | 15931.7 |
| hypothetical protein | APR48_40260 | Not Available | Positive | 8679118 - 8679795 | 24626.1 |
| dna mismatch repair protein muts | APR48_40265 | Not Available | Positive | 8679795 - 8680466 | 24487.5 |
| 2', 3'-cyclic nucleotide 2'-phosphodiesterase | APR48_40270 | Not Available | Negative | 8680502 - 8682619 | 74164.0 |
| ferredoxin reductase | APR48_40275 | Not Available | Negative | 8682729 - 8683952 | 42743.3 |
| globin | APR48_40280 | Not Available | Negative | 8683981 - 8684400 | 16192.2 |
| trans-2-enoyl-coa reductase | APR48_40285 | Not Available | Negative | 8684404 - 8685606 | 42677.9 |
| amino acid abc transporter substrate-binding protein | APR48_40290 | Not Available | Positive | 8685808 - 8686635 | 29393.4 |
| hypothetical protein | APR48_40295 | Not Available | Negative | 8686716 - 8688190 | 53172.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
