Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase nlp/p60 | APR48_40145 | Not Available | Positive | 8653011 - 8653592 | 21093.0 |
| dihydrolipoamide dehydrogenase | APR48_40150 | Not Available | Negative | 8653701 - 8655324 | 55967.8 |
| cobalt transporter | APR48_40160 | Not Available | Positive | 8655901 - 8656578 | 23865.6 |
| cobalamin biosynthesis protein cobw | APR48_40165 | Not Available | Positive | 8656599 - 8657660 | 38605.1 |
| cobalamin biosynthesis protein cobn | APR48_40170 | Not Available | Positive | 8657674 - 8661486 | 137498.0 |
| magnesium chelatase | APR48_40175 | Not Available | Positive | 8661483 - 8662559 | 36780.1 |
| hypothetical protein | APR48_40180 | Not Available | Positive | 8662793 - 8663230 | 15867.9 |
| cysteine--trna ligase | APR48_40185 | Not Available | Positive | 8663413 - 8664795 | 51478.5 |
| nudix hydrolase | APR48_40190 | Not Available | Positive | 8664833 - 8666107 | 44953.3 |
| abc transporter substrate-binding protein | APR48_40195 | Not Available | Negative | 8666124 - 8666984 | 30534.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
