Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | APR48_40040 | Not Available | Negative | 8629268 - 8630503 | 44102.8 |
| abc transporter substrate-binding protein | APR48_40045 | Not Available | Negative | 8630500 - 8631417 | 32689.8 |
| aldehyde dehydrogenase | APR48_40050 | Not Available | Negative | 8631521 - 8633062 | 54142.0 |
| hypothetical protein | APR48_40055 | Not Available | Positive | 8633323 - 8633826 | 17974.5 |
| iclr family transcriptional regulator | APR48_40060 | Not Available | Negative | 8633816 - 8634652 | 29671.9 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | APR48_40065 | Not Available | Positive | 8634860 - 8635930 | 38464.4 |
| abc transporter permease | APR48_40070 | Not Available | Positive | 8635927 - 8636787 | 30929.9 |
| abc transporter permease | APR48_40075 | Not Available | Positive | 8636792 - 8637586 | 28527.7 |
| ferredoxin | APR48_40080 | Not Available | Positive | 8637587 - 8637883 | 10221.3 |
| fad/nad(p)-binding oxidoreductase | APR48_40085 | Not Available | Positive | 8637880 - 8638940 | 37128.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
