Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | APR48_39990 | Not Available | Positive | 8618298 - 8619047 | 28734.8 |
| hypothetical protein | APR48_39995 | Not Available | Positive | 8619044 - 8619931 | 31979.3 |
| hypothetical protein | APR48_40000 | Not Available | Positive | 8620003 - 8620974 | 34182.3 |
| amidase | APR48_40005 | Not Available | Positive | 8620971 - 8622428 | 52925.5 |
| hypothetical protein | APR48_40010 | Not Available | Positive | 8622746 - 8623234 | 16971.4 |
| hypothetical protein | APR48_40015 | Not Available | Positive | 8623248 - 8624759 | 52885.2 |
| hypothetical protein | APR48_40020 | Not Available | Negative | 8624816 - 8625574 | 26459.8 |
| ammonia channel protein | APR48_40025 | Not Available | Positive | 8625992 - 8627227 | 42523.2 |
| hypothetical protein | APR48_40030 | Not Available | Positive | 8627234 - 8627548 | 11478.8 |
| thiamine pyrophosphate-binding protein | APR48_40035 | Not Available | Negative | 8627545 - 8629224 | 60013.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
