Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | APR48_03175 | Not Available | Positive | 680147 - 680920 | 25961.9 |
| toxin-antitoxin system, toxin component, pin family protein | APR48_03180 | Not Available | Negative | 681014 - 681589 | 21544.9 |
| dna-binding protein | APR48_03185 | Not Available | Negative | 681586 - 682053 | 17244.8 |
| abc transporter substrate-binding protein | APR48_03195 | Not Available | Positive | 684160 - 685221 | 38180.2 |
| diguanylate cyclase | APR48_03200 | Not Available | Positive | 685218 - 688238 | 110558.0 |
| nad-dependent dehydratase | APR48_03205 | Not Available | Positive | 688284 - 688928 | 22634.7 |
| feruloyl esterase | APR48_03210 | Not Available | Positive | 689123 - 690970 | 62746.3 |
| hypothetical protein | APR48_03215 | Not Available | Negative | 691130 - 692134 | 34522.1 |
| carbonate dehydratase | APR48_03220 | Not Available | Negative | 692226 - 692918 | 25423.4 |
| aldehyde dehydrogenase | APR48_03225 | Not Available | Negative | 692941 - 693546 | 21153.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
