Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel responsive regulator | APR48_39940 | Not Available | Negative | 8606278 - 8606748 | 17377.5 |
| hydantoin utilization protein b | APR48_39945 | Not Available | Positive | 8606896 - 8608563 | 58718.8 |
| methylhydantoinase | APR48_39950 | Not Available | Positive | 8608560 - 8610692 | 75789.1 |
| hydroxyacid dehydrogenase | APR48_39955 | Not Available | Positive | 8610689 - 8611708 | 35743.0 |
| 3-methylaspartate ammonia-lyase glutamate mutase | APR48_39960 | Not Available | Positive | 8611722 - 8613098 | 49227.3 |
| hypothetical protein | APR48_39965 | Not Available | Positive | 8613095 - 8613406 | 11624.9 |
| hypothetical protein | APR48_39970 | Not Available | Positive | 8613477 - 8614475 | 34844.7 |
| hypothetical protein | APR48_39975 | Not Available | Positive | 8614561 - 8615460 | 31900.5 |
| porin | APR48_39980 | Not Available | Positive | 8615588 - 8616826 | 42680.3 |
| glutamate-1-semialdehyde 2,1-aminomutase | APR48_39985 | Not Available | Positive | 8616984 - 8618213 | 43847.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
