Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR48_39885 | Not Available | Negative | 8596341 - 8597258 | 33143.3 |
| quercetin 2,3-dioxygenase | APR48_39890 | Not Available | Positive | 8597452 - 8598171 | 26220.7 |
| chloroperoxidase | APR48_39895 | Not Available | Positive | 8598225 - 8598878 | 23119.8 |
| hypothetical protein | APR48_39900 | Not Available | Positive | 8598920 - 8599207 | 10213.7 |
| amidohydrolase | APR48_39905 | Not Available | Positive | 8599288 - 8601195 | 69679.9 |
| doxx family protein | APR48_39910 | Not Available | Positive | 8601201 - 8601599 | 14373.8 |
| mfs transporter | APR48_39915 | Not Available | Positive | 8601592 - 8603178 | 56135.3 |
| arylesterase | APR48_39920 | Not Available | Positive | 8603230 - 8604051 | 29896.4 |
| diaminopimelate epimerase | APR48_39925 | Not Available | Positive | 8604144 - 8605019 | 31462.5 |
| hypothetical protein | APR48_39930 | Not Available | Positive | 8605016 - 8605717 | 25822.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
