Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acriflavine resistance protein b | APR48_39785 | Not Available | Positive | 8573528 - 8576698 | 112802.0 |
| two-component system response regulator | APR48_39790 | Not Available | Positive | 8576721 - 8577407 | 25632.4 |
| histidine kinase | APR48_39795 | Not Available | Positive | 8577404 - 8578780 | 50184.3 |
| sulfurtransferase | APR48_39800 | Not Available | Positive | 8578934 - 8579872 | 32778.7 |
| histidine kinase | APR48_39805 | Not Available | Positive | 8579930 - 8581318 | 50802.2 |
| luxr family transcriptional regulator | APR48_39810 | Not Available | Positive | 8581333 - 8581986 | 23557.6 |
| dna-binding protein hu | APR48_39815 | Not Available | Positive | 8582301 - 8582591 | 9752.56 |
| hydrolase nlp/p60 | APR48_39820 | Not Available | Positive | 8582742 - 8583281 | 18767.3 |
| carbon starvation protein a | APR48_39825 | Not Available | Positive | 8583398 - 8585476 | 73755.6 |
| hypothetical protein | APR48_39830 | Not Available | Positive | 8585491 - 8585721 | 8529.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
