Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug dmt transporter permease | APR48_39685 | Not Available | Positive | 8551643 - 8552620 | 33889.1 |
| cytochrome b6 | APR48_39690 | Not Available | Negative | 8552802 - 8554172 | 49097.2 |
| serine/threonine protein phosphatase | APR48_39695 | Not Available | Negative | 8554169 - 8555364 | 42192.6 |
| hypothetical protein | APR48_39700 | Not Available | Negative | 8555414 - 8556340 | 33205.0 |
| abc transporter atp-binding protein | APR48_39705 | Not Available | Negative | 8556457 - 8557590 | 40849.9 |
| polyamine abc transporter permease | APR48_39710 | Not Available | Negative | 8557587 - 8558414 | 29649.7 |
| spermidine/putrescine abc transporter permease | APR48_39715 | Not Available | Negative | 8558411 - 8559226 | 29955.7 |
| abc transporter substrate-binding protein | APR48_39720 | Not Available | Negative | 8559354 - 8560469 | 41661.6 |
| aminomethyltransferase | APR48_39725 | Not Available | Positive | 8560754 - 8561458 | 25483.3 |
| polysaccharide deacetylase | APR48_39730 | Not Available | Positive | 8561455 - 8562345 | 33477.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
