Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5-phosphate oxidase | APR48_39575 | Not Available | Positive | 8528948 - 8529475 | 19619.5 |
| hypothetical protein | APR48_39580 | Not Available | Positive | 8529615 - 8531780 | 73682.8 |
| haloacid dehalogenase | APR48_39585 | Not Available | Negative | 8531841 - 8532572 | 26336.6 |
| keto-deoxy-phosphogluconate aldolase | APR48_39590 | Not Available | Negative | 8532580 - 8533227 | 22237.0 |
| phosphogluconate dehydratase | APR48_39595 | Not Available | Negative | 8533218 - 8535056 | 64437.4 |
| hypothetical protein | APR48_39600 | Not Available | Negative | 8535279 - 8535884 | 20637.7 |
| calcium transporter chac | APR48_39605 | Not Available | Positive | 8535990 - 8536724 | 26992.1 |
| superoxide dismutase | APR48_39610 | Not Available | Positive | 8536721 - 8537263 | 17912.1 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | APR48_39615 | Not Available | Negative | 8537271 - 8537855 | 19277.0 |
| pyridoxamine 5'-phosphate oxidase | APR48_39620 | Not Available | Positive | 8537888 - 8538418 | 19728.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
