Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_39475 | Not Available | Positive | 8510052 - 8511161 | 39886.1 |
| hypothetical protein | APR48_39480 | Not Available | Positive | 8511194 - 8511571 | 13601.4 |
| pyridine nucleotide-disulfide oxidoreductase | APR48_39485 | Not Available | Negative | 8511594 - 8512805 | 42927.6 |
| hypothetical protein | APR48_39490 | Not Available | Positive | 8512967 - 8513191 | 8136.81 |
| cupin | APR48_39495 | Not Available | Positive | 8513246 - 8513662 | 14367.2 |
| transcriptional regulator | APR48_39500 | Not Available | Positive | 8513736 - 8514245 | 18337.2 |
| fis family transcriptional regulator | APR48_39505 | Not Available | Positive | 8514337 - 8516043 | 63345.1 |
| phenol hydroxylase | APR48_39510 | Not Available | Positive | 8516290 - 8516523 | 9046.79 |
| phenol hydroxylase | APR48_39515 | Not Available | Positive | 8516574 - 8517569 | 37635.5 |
| monooxygenase | APR48_39520 | Not Available | Positive | 8517597 - 8517893 | 10737.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
